PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020693336.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 275aa    MW: 30447.6 Da    PI: 6.784
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020693336.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.31e-06141187455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++ +  r +R+++ +af  L+  lP +     +  +  ++L  +++YIk+L+
  XP_020693336.1 141 SKAISSRIYRAKVAEAFKALKNALPCS-----ETGNQTSMLDNVIDYIKYLK 187
                     66677799******************8.....5789999***********95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MLDRSASPLV NLHPGLQAPY SPLDTESSNW NYMKMASFID TGASRVNQLM PRVNPLDTQA  60
LNSSSNYLCP ATKVEGLEDF SHSRIGLPLP NTHEEQANIS KDIDYEEPAK IGVLKKPKSK  120
HCSSVAQQAE ETMETKKDRP SKAISSRIYR AKVAEAFKAL KNALPCSETG NQTSMLDNVI  180
DYIKYLKLRL KVLSQTRLNG EASAHSFVDI EGFGHYLLHP QACFEPLEEM VGHLLKSNPQ  240
VANELLEHKG FAIVPMDSAY AILQTSLNPC SNSCQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30980.12e-16bHLH family protein