PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020693559.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ZF-HD
Protein Properties Length: 249aa    MW: 27687.6 Da    PI: 8.8746
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020693559.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer100.89.9e-3259113358
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                     +v+Y+eClkNhAas+Gg+a+DGCgEfmps g+egt +alkC+AC CHRnFHR+e+e
  XP_020693559.1  59 AVKYRECLKNHAASIGGNATDGCGEFMPS-GKEGTLEALKCSACHCHRNFHRKETE 113
                     689*************************9.999********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MNFSSHDGDI PIPITSTFHL GGGAHCQSQS NCIGPPPPPP ETLTPLPLPT PDNSKKGIAV  60
KYRECLKNHA ASIGGNATDG CGEFMPSGKE GTLEALKCSA CHCHRNFHRK ETEGISSSSC  120
DCFHFKGGRK MEGYISRPSP HQMIMPLGAL QTSESDDMEG FMTRTPIVKK RFRTKFSADQ  180
KEKMLGFAEK VGWRLQKQEE SLVQQFCQEI GIKRRVLKVW MHNNKHNLAK KSRNLQLDWS  240
TSTTTVTDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02540.13e-70ZF-HD family protein