PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020693581.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TCP

Protein Properties

Length: 299aa MW: 31786.4 Da PI: 8.5545

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020693581.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	125.8	4.5e-39	69	155	2	90
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgka 90 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tg+++++as+ +a ss s ++ ++ XP_020693581.1 69 APKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASALtSAPSSISHTK---FNEP 155 789******************************************************************88733333333333...2322 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MDPNKGSSKI PPEPPKFLQN ADKRDPSRDS RDLQVLVSST SSGAERELPL VAATSTSTAE 60 KDDQRRQLAP KRSSNKDRHT KVDGRGRRIR MPALCAARIF QLTRELGHKS DGETIQWLLQ 120 QAEPSIIAAT GSGTIPASAL TSAPSSISHT KFNEPPPSAM ATSSRPNWAT GLWPPPLGSF 180 AGSGFLPQTS NLGGEGSAGG FMQRIGLPGL ELPGAGIGQM SFASMLGGHG QQMPGLELGL 240 SQDGHIGVLN PQVLSQFYQQ MGQGRGGGTE HLQHHLHQHQ QTHQSQGSLE KDDSEGSSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	9e-73	TCP family protein