PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020693689.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 361aa MW: 40936.1 Da PI: 5.4743

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020693689.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176	1.1e-54	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtd+elv +yLk+kv+++k+el evi+ vd+yk++PwdLp k + +++ ew+fF++rd+ky++g+r+nrat+sgyWkatgkd++++ XP_020693689.1 6 LPPGFRFHPTDDELVGYYLKRKVDAQKIEL-EVIPVVDLYKFDPWDLPeKsFLPKRDMEWFFFCPRDRKYPNGSRTNRATNSGYWKATGKDRTIT 99 79**************************.99**********95344555788*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++ +g++ktLvfy+grap ge+tdWvmheyrl XP_020693689.1 100 C-ENSIKGMRKTLVFYRGRAPGGERTDWVMHEYRL 133 .8889**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MGPMSLPPGF RFHPTDDELV GYYLKRKVDA QKIELEVIPV VDLYKFDPWD LPEKSFLPKR 60 DMEWFFFCPR DRKYPNGSRT NRATNSGYWK ATGKDRTITC ENSIKGMRKT LVFYRGRAPG 120 GERTDWVMHE YRLCEHLPQG NISFLGGYAL CRVVKRNEHL HQGEAKFKRV PPSVARETSK 180 RKYNSKVPSS SLEGSSSQVV SLLDVSNGPF HSNFFKETQF ELASAMVDAS DQSPLVLSDV 240 STGFTIEEDI SEQFFPVQFP FSTESCLTNG ISPVSSFSSL TDEAFSVEQI DRNCLSSICP 300 SPLHSMSIYY NEESLPLQSL DWVADNSFLT RSNGIIEPLC RQASGDEQNL WSQEDGSMFV 360 I

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MGPMSLPPGF RFHPTDDELV GYYLKRKVDA QKIELEVIPV VDLYKFDPWD LPEKSFLPKR  60
DMEWFFFCPR DRKYPNGSRT NRATNSGYWK ATGKDRTITC ENSIKGMRKT LVFYRGRAPG  120
GERTDWVMHE YRLCEHLPQG NISFLGGYAL CRVVKRNEHL HQGEAKFKRV PPSVARETSK  180
RKYNSKVPSS SLEGSSSQVV SLLDVSNGPF HSNFFKETQF ELASAMVDAS DQSPLVLSDV  240
STGFTIEEDI SEQFFPVQFP FSTESCLTNG ISPVSSFSSL TDEAFSVEQI DRNCLSSICP  300
SPLHSMSIYY NEESLPLQSL DWVADNSFLT RSNGIIEPLC RQASGDEQNL WSQEDGSMFV  360
I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17980.1	1e-83	NAC family protein