PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020693735.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 362aa    MW: 39858 Da    PI: 8.8991
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020693735.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH314.7e-10177224455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  XP_020693735.1 177 SHSLAERVRREKISQRMKLLQDLVPGC----NKITGKALMLDEIINYVQSLQ 224
                     8**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MDRLTSITPL PMAVATAITG EFINNSLSFM PTNGLIPFPT DPGFTKRAAS YCSFSSVNYG  60
DAQLGMLETG KLSRVSSSQS LKSKENSSVT DLGLSPGENN ARKRKTTPKS KTKVAEESNL  120
NVKKYRSAET SDENVAFQLK EVLNGEKKRG KEDGLELPEP PKDYIHVRAR RGQATDSHSL  180
AERVRREKIS QRMKLLQDLV PGCNKITGKA LMLDEIINYV QSLQRQVEFL SMKLATLNPR  240
LDCNLTNVVS KEPSMGQTNT SLPRSVYPLD NLATVPCTHQ SNDGSSLHVC VTKGMETQSP  300
FSQVNYTLSS DAFGGTTSQI GNLWDYDLHS VVQMSLVHNQ ETGFTSQNFH GKLATNNMKA  360
EL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.36e-61bHLH family protein