PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020693851.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 251aa    MW: 27642.4 Da    PI: 5.4866
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020693851.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.6e-18112162255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrd    + k  r++lg+f+ta eAa+a++ a+ +++g
  XP_020693851.1 112 RYRGVRQRP-WGKFAAEIRDS---KrKGSRVWLGTFDTAVEAARAYDCAAFEMRG 162
                     7********.**********3...2235*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MPSSNSPPLD QLFAAAGTSL NDILEAIPTP PPVPAAAPAD ITISDYLDSP EPFTSEFKVV  60
DSPVSMIRSG RNTPPSSPSD LRLTLNIPRP AAPKVEWIEP SGSGPDWIEG RRYRGVRQRP  120
WGKFAAEIRD SKRKGSRVWL GTFDTAVEAA RAYDCAAFEM RGSKAILNFP NEVRSSPEKR  180
KRKEEEEPQM LAVKMQRTEE AQRNLPDGEV LTPSSWTAVW ENADVKGLFS LPPLSPISPH  240
PTLGFPQLMV I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.18e-36ERF family protein