PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020693883.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 188aa    MW: 20344.9 Da    PI: 9.8814
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020693883.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.13.4e-214493255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr ++ +gr++AeIrd ++    ++r +lg+f+taeeAa+a+++a+++l+g
  XP_020693883.2 44 HYRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTFDTAEEAARAYDEAARNLRG 93
                    69*******.**********883....5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MMAVDTLRLG KEAFGAAGEE KTTPASTAAA GGGGGGGGGT KEGHYRGVRK RPWGRFAAEI  60
RDPWKKTRKW LGTFDTAEEA ARAYDEAARN LRGPKAKTNF TDGDVPSSES SSPPAIWTAA  120
QWPQAFPDGR DLVIVAPTAG SEFSGYRFDA VEMMVRTEQE KKMKRSVAEE RITKKPLGID  180
LNLPPPLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.19e-23ERF family protein