PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020693884.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 254aa    MW: 27399.9 Da    PI: 10.0586
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020693884.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.25.3e-07109153554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     h +rEr+RR+r+ ++++ L  +l ++     +K +K +i++ A   +++L
  XP_020693884.2 109 HMMRERQRRERLSQSYADLYAILSPS-----TKADKNSIVQTAAALVREL 153
                     889*******************9887.....8999999999998888777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MDPFFFPDQD ELQDFWGLSV DPTVDLLDAV TQHLSRPASS MARRSAFSKY TGPIAAPPQA  60
QGSGGGGGGN IHRRIIELLR RIRRGKQESK GGGGGGSSSG GEGSRGFRHM MRERQRRERL  120
SQSYADLYAI LSPSTKADKN SIVQTAAALV RELKGVKEGL QKRNEELMRM AAPAEEMAEG  180
TSSERTEQRI EVEGDRVITV RAENSASAID SVIGALRCLE RMDVKARAIR FAAAAGGGMT  240
GGVMMIETNK GSTQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114119RQRRER