PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020693963.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ZF-HD
Protein Properties Length: 249aa    MW: 26886.2 Da    PI: 8.7656
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020693963.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer98.74.4e-313085357
     ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrev 57
                    ++ ++eClkNhAaslGgha+DGC+Efmps+ ++ +++++lkCaACgCHRnFHRr +
  XP_020693963.1 30 TIIHRECLKNHAASLGGHALDGCCEFMPSPAATlADPTSLKCAACGCHRNFHRRVS 85
                    5789***************************999********************75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MEQKAQAEAQ SKLYPLPNGA VKKSHHPHPT IIHRECLKNH AASLGGHALD GCCEFMPSPA  60
ATLADPTSLK CAACGCHRNF HRRVSFAATS AEEDEIEGEV EGEGRGRKSS SAGRQPLSSF  120
FTSAPHTLLA LSRDERPSPA SVSRKRFRTK FSAEQKGRMM ELSERLGWKL QKRDEGLVED  180
YCREIGVGKG VFKVWMHNNK YQLFRALGRG DGRSNVAGVV GGGDGRMGEG NGICGEADGN  240
VMNGSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69600.16e-52ZF-HD family protein