PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020693970.2

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 262aa MW: 30176 Da PI: 5.2029

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020693970.2	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.3	1.2e-52	5	130	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+v+yL++++ + ++++ +i++++iyk++Pw+Lp k + +e ewyfF++rd+ky++g r+nrat+sgyWkatg+dk+++s XP_020693970.2 5 LPPGFRFHPTDEELIVYYLRNQAMSLPCPA-PIIPQLNIYKFDPWELPGKSELSEGEWYFFTPRDRKYPNGLRPNRATASGYWKATGTDKAIYS- 97 79*************************9.88***********88888999**********************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ vg+kk Lvfy+gr pkg ktdW+mheyrl XP_020693970.2 98 RSRSVGVKKALVFYQGRPPKGCKTDWIMHEYRL 130 9999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MGYELPPGFR FHPTDEELIV YYLRNQAMSL PCPAPIIPQL NIYKFDPWEL PGKSELSEGE 60 WYFFTPRDRK YPNGLRPNRA TASGYWKATG TDKAIYSRSR SVGVKKALVF YQGRPPKGCK 120 TDWIMHEYRL HNDTHSPFKA NKSMILDEWV LCRIYQKRQT RRNTEDVVCG IETPVQEESA 180 MENEDYEKEP MFPRSCSLVH LLEADYSQLF GDSALGSIDD LFESCIGDDG DTPIEDSATM 240 RIAGNHNVLF GNQIFVDPIF QH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	1e-96	NAC family protein