PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020694004.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family Dof
Protein Properties Length: 183aa    MW: 19859 Da    PI: 7.8649
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020694004.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1261.1e-391979262
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    +e++l+cprC+stntkfCy+nny+lsqPr+fCk CrryWt+GGalrnvPvGgg+rkn k+s
  XP_020694004.1 19 PEQNLQCPRCESTNTKFCYFNNYNLSQPRHFCKDCRRYWTRGGALRNVPVGGGTRKNSKRS 79
                    68999****************************************************9887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MQGTTSASAT ATKSPFSDPE QNLQCPRCES TNTKFCYFNN YNLSQPRHFC KDCRRYWTRG  60
GALRNVPVGG GTRKNSKRSS ATSAVAATSA VNPKRPLPSS STGEAQRSEL LPAPFTPVDD  120
DHRMLDITGS FSSLLSSTNH LGNFLDGEAA TPALAESFLG LPVDSSSWGW PDLTIYTPDT  180
RFE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.15e-38Dof family protein