PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020694038.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 256aa    MW: 28079.8 Da    PI: 10.3851
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020694038.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.33.6e-1066110554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     h+ +E++RR+riN+ +++Lr + P++      K++Ka+ L +++e +++L
  XP_020694038.1  66 HSLAEKKRRERINTHLATLRHMTPNS-----SKMDKASLLARVIEQVRDL 110
                     999**********************8.....7************988877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MKNSSNFSAE SNRADHTSSP YNGALLLPMA SSSSAPALLS HGRDLQSSSS SSFSTDARTA  60
AALRIHSLAE KKRRERINTH LATLRHMTPN SSKMDKASLL ARVIEQVRDL NRKAANINKI  120
SAIPSEMNQV IVECDNGSLN RPPFSSSSFA DQNIQIKATL CCADRPHLFS DLMKAFQILR  180
LKAVRAELTS VGGRTQNVFT LCRKDGNGNG NVCLSSLIES IRNVLTKIAS SEESAFIDQS  240
EKRQRFLATN YFNMSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.14e-33bHLH family protein