PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020694195.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GATA
Protein Properties Length: 250aa    MW: 28290.9 Da    PI: 8.8721
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020694195.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.37.5e-17179213135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     Cs+C +  Tp+WR gp g+ktLCnaCG+++++ +l
  XP_020694195.1 179 CSHCLSQRTPQWRTGPLGPKTLCNACGVRFKSGRL 213
                     *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MDVYGKAKVP GEVSTDFQSE MLSSPAGAIW EDFIPGQNME RDEEDNISLQ WLSFFMEDCF  60
SSTTSFNFPT PLIPTKTNNA SNSCATDPYP APLRNPNPCS FQKPSFPAKA RNKRRKTKTS  120
SQFINSSIDS PLLHQKHWLA ESELLISPKM EKNENKPETE DEEKGINGRG VQHQQPKRCS  180
HCLSQRTPQW RTGPLGPKTL CNACGVRFKS GRLLPEYRPA KSPTFVNYKH SNSHKKVMEM  240
RMADFSTNSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.11e-36GATA family protein