PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020694307.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family MYB_related
Protein Properties Length: 92aa    MW: 10538.4 Da    PI: 7.5255
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020694307.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.91.1e-081460447
                     S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     W++e  +l+ +a +++  +   +W ++ar +g g+++++ + ++  +
   XP_020694307.1 14 WSKEQNKLFERALAKYDEEtpnRWQKVARFVGGGKSPEDARRHYERL 60
                     *****************99************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MTSSSSSRSS SSGWSKEQNK LFERALAKYD EETPNRWQKV ARFVGGGKSP EDARRHYERL  60
LEDVQRIESG DVPIPNYPSS GGNEQQRYRN DD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.12e-28MYB_related family protein