PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020694474.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 205aa    MW: 21740.4 Da    PI: 9.6538
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020694474.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.3e-192676155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++++GVr ++ +gr++AeIrdp   gk++r++lg+f++ae+Aa+a++ a+++l+g
  XP_020694474.1 26 TRFRGVRKRP-WGRFAAEIRDP---GKKTRVWLGTFDSAEDAARAYDTAARALRG 76
                    589*******.**********8...557*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MASRKGRTQA AALPAAAPPL PPGMETRFRG VRKRPWGRFA AEIRDPGKKT RVWLGTFDSA  60
EDAARAYDTA ARALRGPKAK TNFSAIPSHA STLGGGSGSG SVPLSFFHQQ LPPPARPATS  120
SLSSTVESFS GPRLSVPPAI YLRQLVQPAP PRVLDGDQDC HSDCGSSSSV VDDGDIASAY  180
RQPFPFDLNL LPPPDDELQS TALHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.13e-23ERF family protein