PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020694607.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 250aa    MW: 26683.8 Da    PI: 8.687
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020694607.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.4e-20105155255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+++AeIrdp +ng  +r++lg+f taeeAa a+++a+ +++g
  XP_020694607.1 105 HFRGVRRRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEEAAIAYDRAAYRMRG 155
                     79*******.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MYNLTLESIR QHLLDDAEIP SSVVTSPSPP TYLRSSSFGR LVADQWIDLP FRPDDSDDMV  60
VYLALHDAFR NGWFPGDSGA AGTALLEPAK PDSPDPEAAP EKGKHFRGVR RRPWGKFAAE  120
IRDPAKNGAR VWLGTFETAE EAAIAYDRAA YRMRGSRALL NFPLRIGTDA CAGESPAMIS  180
PVKRAISVSS PSSSSSSSSN SFSSSSMSSQ STGSVKRRKR GQAAAASQSP DSPAAVCSPA  240
PVPVQSPAKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.12e-41ERF family protein