PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020694690.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family FAR1
Protein Properties Length: 246aa    MW: 29000.8 Da    PI: 6.9362
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020694690.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR157.83.7e-1853140290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                      Y++YA++v Fsvrk+++ +  + ++i  ++fvCsk g+++  + +  k + ++++trtgC a+++   ++ g+w+v+k+ +  nHela
  XP_020694690.1  53 IYCHYAHNVSFSVRKDHHCYWPNLRKIRIKDFVCSKAGFKKGIDLN-AKLKYRKSNTRTGCPAMIRFYVDHGGEWKVQKCIESYNHELA 140
                     7*****************************************9999.88889999********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MDIVLEDIED WSEMKGFTQE LQLRGGEVLQ QNTQHNLDIL SVVCNSEKEA YEIYCHYAHN  60
VSFSVRKDHH CYWPNLRKIR IKDFVCSKAG FKKGIDLNAK LKYRKSNTRT GCPAMIRFYV  120
DHGGEWKVQK CIESYNHELA RPEDQHLLRS YRNISEEKAF VLKSMMDAEI RTIDAFTYLA  180
DEVGGRGYVR FSKRDAYNFV QKGKRGKIET VDTNSLIELF KDRANSDNMF AWEVQYDEED  240
RLMNFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.18e-18FAR1 family protein