PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020694770.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

Dof

Protein Properties

Length: 336aa MW: 35582.7 Da PI: 8.7811

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020694770.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.5	3.5e-39	70	130	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e alkcprCdstntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+++ XP_020694770.1 70 PEPALKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRTK 130 67899*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MVFSSLPIYL DPPNWSQQTS HQPPSTTTIS HPPQLSSLMA DPPPHPIGLP GPTRPVSMAE 60 RARLAKIPQP EPALKCPRCD STNTKFCYFN NYSLSQPRHF CKTCRRYWTR GGALRNVPVG 120 GGCRRNKRTK AGSTSSKTSF SAGASSSTAT ASMNSTTILP PPPPPQLPFM THFQPLSDYS 180 TTNIGLGFTG IHPLDSVDYQ IGSSGGGGVG LEQWRMQQMQ QFPFMGGLDA SSTAPATVAG 240 LFPFDGESSG NDHQGYSTGR MLTKASSSGI ISQLASVKME DSSHGINLQR QYLGVTGNDQ 300 YWDGNGDGGA SVGNGGGSGW LGDLSGFNSS SSGNIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.2	2e-44	Dof family protein