PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020694813.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 250aa    MW: 28556.2 Da    PI: 8.5892
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020694813.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM170.26.5e-53101391128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPt+eel+ +yL+kkv+ + ++l +vi++vd++k+ePwdL+ k ++ +  ++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++
  XP_020694813.2  10 VPPGFRFHPTEEELLYYYLRKKVAYEAIDL-DVIRDVDLNKLEPWDLNdKcRIGSgPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAI 103
                     69****************************.9***************843444443456************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + ++++ +g++ktLvfy+grap+g ktdW+mheyrl
  XP_020694813.2 104 HLSNSKRIGMRKTLVFYTGRAPHGLKTDWIMHEYRL 139
                     **********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MNSGNGQLAV PPGFRFHPTE EELLYYYLRK KVAYEAIDLD VIRDVDLNKL EPWDLNDKCR  60
IGSGPQNEWY FFSHKDKKYP TGTRTNRATT AGFWKATGRD KAIHLSNSKR IGMRKTLVFY  120
TGRAPHGLKT DWIMHEYRLD DDTSDVQEDS WVVCRVFKKK NLYKCNNIPS DQILPQETNL  180
NLFKAPPCPN SFPQPQTHPS FDHFSFLSNN HNNNNTMHLP QLLSSDQSSA AMPPPPPSSL  240
PLTSSALTIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79580.13e-93NAC family protein