PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020694968.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 177aa    MW: 19603.2 Da    PI: 8.4401
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020694968.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.2e-192270355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++GVr+++ +gr++AeIrdp   gk+ r++lg+f+tae Aa+a++aa+ +++g
  XP_020694968.1 22 FRGVRRRP-WGRYAAEIRDP---GKKIRVWLGTFDTAEAAARAYDAAAIEFRG 70
                    8*******.**********8...557************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MAPRTKITCA ATMAAAGKEI QFRGVRRRPW GRYAAEIRDP GKKIRVWLGT FDTAEAAARA  60
YDAAAIEFRG SRAKTNFPYS DVGEESSEAV PLDLNRDGPT NFLFRDFRKE LAAAAKPAYF  120
FGKSNEMAAV VTEEPFFFGM KDESDTSPVE DFTRSPPPTR FRSLGIDLNL PPPAEIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-27ERF family protein