PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020695039.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family EIL
Protein Properties Length: 451aa    MW: 51158.6 Da    PI: 5.2911
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020695039.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3310.16.3e-95433371290
                     XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXX...........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksn...........ksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpv 84 
                     e+l++r w dq +++rl+e+ +++l+ +e++ +  ++n              +q+rrkk sr  D+ +kYMl+    c+aqGfvYgii+e+gk+ 
  XP_020695039.1  43 EDLQRRIWLDQLRIERLREEAEKKLHGEEESHRDDNNNncvestnnnlsPKMQQSRRKKLSRVRDSLIKYMLQLTDQCKAQGFVYGIISETGKTI 137
                     89******************999998888874444444578888888987889****************************************** PP

                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--H CS
            EIN3  85 egasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkel 179
                     +g+sd LraWWkekv+f   +p a+ + + +  +++ +      + +++ sl++l DT lgSLLsa m hc+ppqrrfplekgv+pPWWPtG+e 
  XP_020695039.1 138 TGSSDTLRAWWKEKVRFSHSAPKALEDFARERGLPGCR------NVASPGSLKDLSDTMLGSLLSAMMPHCNPPQRRFPLEKGVPPPWWPTGEES 226
                     **************************998888888843......45799********************************************** PP

                     HHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXX CS
            EIN3 180 wwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkv 274
                     ww+   + +   +ppykkphdlkkawkv+vL + +khm+p+++ +r+l+r+sk+lqdkmsa++  ++++vl+ ee+ +++ +a+      +++++
  XP_020695039.1 227 WWALNDMTRGVPPPPYKKPHDLKKAWKVGVLLSIVKHMAPDLDMVRRLVRKSKCLQDKMSARDLRIWMAVLKDEEEDYRRGKAEAGDPFLEENNI 321
                     ***444666666********************************************************************999966444467777 PP

                     XXXXXXXXXXXXXXXX CS
            EIN3 275 tlsceqkedvegkkes 290
                     +++++++e ++ +  +
  XP_020695039.1 322 NANERAEESSDFNPTK 337
                     7777777777744433 PP
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    
MEGTGSSQLL DSEMLQLTSM TSNAQSPLSR CEEDEYDDAM TIEDLQRRIW LDQLRIERLR  60
EEAEKKLHGE EESHRDDNNN NCVESTNNNL SPKMQQSRRK KLSRVRDSLI KYMLQLTDQC  120
KAQGFVYGII SETGKTITGS SDTLRAWWKE KVRFSHSAPK ALEDFARERG LPGCRNVASP  180
GSLKDLSDTM LGSLLSAMMP HCNPPQRRFP LEKGVPPPWW PTGEESWWAL NDMTRGVPPP  240
PYKKPHDLKK AWKVGVLLSI VKHMAPDLDM VRRLVRKSKC LQDKMSARDL RIWMAVLKDE  300
EEDYRRGKAE AGDPFLEENN INANERAEES SDFNPTKPAA NMLDHMAVLP ETEESSHAWI  360
DVLFNSFHRG AINPGEDDGF LQQNESNRSF PLQMQGYDVS IDGVNKRRSV DLNAANVSFE  420
TALGGAPMEL GYLLGMENWQ VNQSNGGFLN C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20770.13e-94EIL family protein