PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020695082.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

WOX

Protein Properties

Length: 262aa MW: 27812.1 Da PI: 5.8359

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020695082.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	50.6	3.2e-16	20	80	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ Fe+ +p +ee ++ k l ++ +++V++WFqNrR + ++ XP_020695082.1 20 RSRWTPKPEQILILESIFESgMVNPAKEETVRIRKLLekfgSVGDANVFYWFQNRRSRSRR 80 89***************99***********************************997 PP
2	Wus_type_Homeobox	106.1	2.2e-34	19	82	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+kee+ ri++ Le++G ++d+NVfyWFQNr++R+r++q XP_020695082.1 19 VRSRWTPKPEQILILESIFESGMVNPAKEETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQ 82 589***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MEDNQTNSGN LPASAGEPVR SRWTPKPEQI LILESIFESG MVNPAKEETV RIRKLLEKFG 60 SVGDANVFYW FQNRRSRSRR RQRQIQASLA AASAVAGGGK TMEYEKSVAA PAAVAMASCS 120 TSCTSSSSSS SSSSGGGGGA GFYYGASSSV NPSSMSSLAG FVGSYKADDL FSISQQMGAV 180 GEDIYTGSYE AAQMQYQPGS ITVFINGIPS EVPSGLINMR AMFGHDAMLI HSSGEPLPIN 240 EYGILLQSLQ MGESYYLVAR PT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03660.1	2e-32	WOX family protein