PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020695101.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TALE

Protein Properties

Length: 161aa MW: 18869.2 Da PI: 7.7919

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020695101.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	31.8	2.4e-10	84	119	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+++q+ +WF N+R ++ XP_020695101.1 84 NKWPYPSESEKVALAESTGLDQKQINNWFINQRKRH 119 5679*****************************985 PP
2	ELK	39.6	1.1e-13	39	60	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKhqLl+KYsgyLgsL+qE+s XP_020695101.1 39 ELKHQLLKKYSGYLGSLRQELS 60 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence
MHRTADHEKS GACSAEEDQF EVSLGETVLE GEQAAEDREL KHQLLKKYSG YLGSLRQELS 60 KKKKKGKLPK EARQKLLSWW ELHNKWPYPS ESEKVALAES TGLDQKQINN WFINQRKRHW 120 KPSEEMQFMV LDGYQQHQQQ NTTFYLEGHF MGDGNLYRIG S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	8e-64	TALE family protein