PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020695194.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 322aa MW: 36978.9 Da PI: 6.4367

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020695194.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.9	8.3e-32	60	113	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+++AtPk +l+lm+v gL+++hvkSHLQ+YR+ XP_020695194.1 60 PRLRWTPDLHMCFVRAVERLGGQDRATPKLVLQLMNVRGLSIAHVKSHLQMYRS 113 8****************************************************7 PP
2	Myb_DNA-binding	48.1	2.7e-15	61	112	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+av++lGg t+k++ + m+ g++ ++ks++q+y+ XP_020695194.1 61 RLRWTPDLHMCFVRAVERLGGQdraTPKLVLQLMNvRGLSIAHVKSHLQMYR 112 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MDSACSEGSE NPNLSEKDED DEEGDENPKT EGSSSNSTVE EGERKINSGS VRQYNRSKIP 60 RLRWTPDLHM CFVRAVERLG GQDRATPKLV LQLMNVRGLS IAHVKSHLQM YRSKKIDDSG 120 QAVAINPIRT LIEREDQRNL YRHSNLAILN GFEQRYSNLR YASSWIGHGF WNSLRPGSYS 180 PAADTSFLTH QRPMSNWDFH TRSSSINVRA NTSSNETKLN HKEFNSMHYN ENEIPQNMTM 240 RPILKEEDNE PDLNLSLNIA TRKEKRKRTW EEEEEEDNRL SLSLSSTLSR QEEGFRRKGL 300 MVSEFEAGNQ QAKVTSTLDL TI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	2e-50	G2-like family protein