PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020695233.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NF-YB
Protein Properties Length: 200aa    MW: 20746.9 Da    PI: 8.0536
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020695233.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB169.93e-5335129296
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     +e+drflPianvsrimkk lP+nakisk+aketvqecvsefi fvt+easdkcqrekrktingddllwa++tlGf+ yv plk yl++yre  g+
  XP_020695233.1  35 KENDRFLPIANVSRIMKKSLPSNAKISKEAKETVQECVSEFINFVTGEASDKCQREKRKTINGDDLLWAMTTLGFDSYVVPLKSYLSRYREGGGD 129
                     89****************************************************************************************98776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MKGTKSSAHN QLISPAGSPP SDNDSGRGGG GDATKENDRF LPIANVSRIM KKSLPSNAKI  60
SKEAKETVQE CVSEFINFVT GEASDKCQRE KRKTINGDDL LWAMTTLGFD SYVVPLKSYL  120
SRYREGGGDQ YSIMKGQQMS EEGKGGGGGG SSGGGGADEV GGVGGLCKGT AGPTAPGFPG  180
GNGFYGRSDD GRGSFHGVHW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.16e-57NF-YB family protein