PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020695302.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TCP

Protein Properties

Length: 266aa MW: 28620.1 Da PI: 9.1056

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020695302.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	130.6	1.5e-40	55	143	1	88
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg 88 +a+k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s+g XP_020695302.1 55 PAPKRNSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSISAG 143 589*******************************************************************9997666666666633332 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MDKEPTSVTE LTTRRSNFPL QLLQKKESED LSISSSSSSS SLHPLSLPTD PPKKPAPKRN 60 STKDRHTKVD GRGRRIRMPA LCAARVFQLT RELGHKSDGE TIEWLLQQAE PAVIAATGTG 120 TIPANFTSLN ISLRSSGSSI SAGPSHRLLH SSAAPPPVRL RSDWGWEHEL MAGYTTAPAA 180 HFFPAGEPVW PSYATATMFR EFMNFPSAAP MTLLQGQPQL SGGGGGSGGG EGHLGIMAAL 240 NSYRAVEAGS QEEPERNHHR MTSNDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	2e-48	TCP family protein