PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020695661.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 143aa    MW: 15701.7 Da    PI: 10.0931
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020695661.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.81.6e-1963114256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                     +y+GVr+++ +g+++AeIrd s    + +r++lg+f+taeeAa a+++a+ +++g+
  XP_020695661.1  63 HYRGVRRRP-WGKFAAEIRDSSR---HgARVWLGTFDTAEEAAVAYDRAAFRMRGA 114
                     7********.**********432...25**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MAFSRQQTSA NPSQFLPLNE NDSQDMILLQ VLTEASTMAV ASPMSPPTAK RGAESGGELA  60
TRHYRGVRRR PWGKFAAEIR DSSRHGARVW LGTFDTAEEA AVAYDRAAFR MRGAKALLNF  120
PPGFVLSDGK VKKEGEELME SRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.19e-28ERF family protein