PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020695760.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 146aa    MW: 16192.7 Da    PI: 10.6044
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020695760.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.41.2e-20958255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +gr++AeIrd +    kr+r++lg+f+++eeAa a+++a+++l+g
  XP_020695760.2  9 HFRGVRKRP-WGRYAAEIRDpW----KRARVWLGTFDSPEEAASAYDQAARALRG 58
                    69*******.**********77....26*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MASRGGEVHF RGVRKRPWGR YAAEIRDPWK RARVWLGTFD SPEEAASAYD QAARALRGPK  60
AKTNFPSPPP PPPPPIHLPL DLNQLPCHLW PHYPLPSPPP PPPPATPLLL GSFLRREPAP  120
LPEPRRGLPF DLNEPPPPSA ASLLFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.15e-33ERF family protein