PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020695779.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 256aa    MW: 26949.4 Da    PI: 9.5699
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020695779.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.45.5e-212979155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++aa+++++g
  XP_020695779.1 29 THFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRG 79
                    589*******.**********8...557************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MAPREKGTGA GRSGGMGVPA SCDGGGKETH FRGVRKRPWG RYAAEIRDPG KKSRVWLGTF  60
DTAEEAARAY DAAAREFRGS KAKTNFPSAE NYKSPSPIVN NGGAAGSPCS QSSTVESSIR  120
EAVSIVPPLA TPLPALDLDL LHPGASRFPF QHFTPATVAQ TATVAVAQPF FFFDPFIRSE  180
KAGAMAAAVT IAGHHRNHLL ALKPAIVPSE PNAPVNSGVQ SDSDSSSVVD VHPSPPPTRL  240
RSLNIDLNLP PPPEII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-26ERF family protein