PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020695844.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

C2H2

Protein Properties

Length: 290aa MW: 32111.5 Da PI: 6.4886

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020695844.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.6	4.5e-05	260	282	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp C+++F+++ +L+ H H XP_020695844.1 260 VCPMCSETFRDPVLLVEHVEEdH 282 7*****************98777 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MSTPAFDVLG KHCGVEECEL IDFLPFNCDR CDQVFCLHHR NSTEHLCPVA NQIDMTLLIC 60 PLCAQGVRLL PNEDPDITWD IHVNCECDPS TYQKDSKKKC CPAAGCKEIL FFSNTIRCKD 120 CNQEHCLRHK FAPDHNCAGP KKPDNGFPFL DVLRRSQKSL SSPIQTSNGS AKLGLNFLNA 180 ASTIRASAEA GMQKLSIATN QALRKAKDGM TQGRGASGDL VEQCLQCQDR FSNVNALIEH 240 VEKAHKHTVQ HAFNIVAIDV CPMCSETFRD PVLLVEHVEE DHGDSTGFRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41835.1	8e-91	C2H2 family protein