PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020696170.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

WRKY

Protein Properties

Length: 193aa MW: 21414.7 Da PI: 4.6199

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020696170.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.7	9e-32	111	169	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYG+K+vk+s++pr+YYrC+++gC vkk+ver++edp++v++tYeg Hnh+ XP_020696170.1 111 LDDGFKWRKYGKKSVKNSPNPRNYYRCSTEGCLVKKRVERDNEDPSYVITTYEGIHNHS 169 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MELLDYGVVA AAMTNFPSLR SGGGYSAQNF QMDYDDSSFD LSDYFLADVD PAATPAQQEL 60 PAAVPMVPSS EQNLVPPAVT GNNIRDALPP LPRMEEGSRI AFRTQTDEEN LDDGFKWRKY 120 GKKSVKNSPN PRNYYRCSTE GCLVKKRVER DNEDPSYVIT TYEGIHNHSS PGVVYYATQD 180 SVSGRFHLSG TQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64810.1	2e-39	WRKY family protein