PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020696426.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

Dof

Protein Properties

Length: 228aa MW: 24547.3 Da PI: 8.7838

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020696426.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.4	4.3e-40	53	112	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++alkcprCds ntkfCyynnyslsqPryfCk+CrryWtkGG+lrn+P+Ggg+rknkk XP_020696426.1 53 SQQALKCPRCDSLNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNIPIGGGCRKNKKP 112 5799*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MEITNGHQYQ TMTSYPLNEV APVLSCLKTA ASSPYQLHQG INPSAQFQFQ SESQQALKCP 60 RCDSLNTKFC YYNNYSLSQP RYFCKSCRRY WTKGGSLRNI PIGGGCRKNK KPASSSTSPS 120 SSSKKIPLTQ VNPNSNLDLG HGFLDVLRSG FVGSANTTTT AIGGIQSHCY GFGGDNGVTL 180 PFDGGLISVS NSTTAAANAS AGASTIRHEN CWSGFFNGFS NEIHDGHF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	3e-31	Dof family protein