PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020696444.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NF-YB
Protein Properties Length: 179aa    MW: 19492.8 Da    PI: 5.3516
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020696444.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB185.25.1e-5825121197
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     vreqdrflPian+srimkk+lP n+ki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa+atlGfedy+eplk+yl+kyre+eg
  XP_020696444.1  25 VREQDRFLPIANISRIMKKALPPNGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKLYLQKYREIEG 119
                     69********************************************************************************************9 PP

           NF-YB  96 ek 97 
                     + 
  XP_020696444.1 120 DG 121
                     96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MAAEVPASPC GGSHESGDQS PRSNVREQDR FLPIANISRI MKKALPPNGK IAKDAKETVQ  60
ECVSEFISFI TSEASDKCQR EKRKTINGDD LLWAMATLGF EDYIEPLKLY LQKYREIEGD  120
GKGSAKGAES SSKRDAGGLQ GGNLSGSSMQ GDMKMLQQGS FTEGMNYMNT QYHPGDLSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.12e-67NF-YB family protein