PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020696512.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

ARR-B

Protein Properties

Length: 531aa MW: 59477.2 Da PI: 5.756

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020696512.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	86	3.7e-27	188	241	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+ Wt eLH++F++av+qL G ++A+Pk+il++m+++gL++e+v+SHLQkYR XP_020696512.1 188 KPRVTWTAELHAEFINAVNQL-GLDRAVPKKILDIMNIPGLSRENVASHLQKYRR 241 79*****************.******************************5 PP
2	Myb_DNA-binding	39.4	1.4e-12	190	240	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r WT+e++ +++av+qlG + +k+I m+ g++++++ s++qky+ XP_020696512.1 190 RVTWTAELHAEFINAVNQLGLDraVPKKILDIMNiPGLSRENVASHLQKYR 240 679***********************************************7 PP
3	Response_reg	72.6	1.5e-24	19	126	1	108
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+ + ++ l+++l + gy +v+ a+++++al+ll+e++ +Dl++ D++mp+mdG++ll+ + e ++lp+i+++ + + + + + G XP_020696512.1 19 VLAVDDDAFSLKMLERLLLECGY-KVTIAQHAHDALKLLRENKdiYDLVISDVKMPDMDGFKLLEILGLE-MDLPVIMLSVDCDFKSVMKGIMHG 111 799******************.***********99999****************999654.48****************** PP ESEEEESS--HHHHH CS Response_reg 94 akdflsKpfdpeelv 108 a d+l Kp+ e++ XP_020696512.1 112 AVDYLLKPIRLEDIK 126 ********99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence
MDKCEDSMIA RGFPNELRVL AVDDDAFSLK MLERLLLECG YKVTIAQHAH DALKLLRENK 60 DIYDLVISDV KMPDMDGFKL LEILGLEMDL PVIMLSVDCD FKSVMKGIMH GAVDYLLKPI 120 RLEDIKVIWK HVVRKSLKEK KGSYDLWNKL DHARTSQDVP IKDFKSHGKE RDHDDSDDSD 180 DEATAQKKPR VTWTAELHAE FINAVNQLGL DRAVPKKILD IMNIPGLSRE NVASHLQKYR 240 RGLKRNGMGL SEHFNTYAGT SVYAGSSDFM TLNSRCSAIS FENFGVNGCK TMLAPSTYYP 300 AQQFPSGRAT MQPTWFTHPF NGQNDLNRKY ANNTKSSEVI TGPQHSINPQ TDQFVTENPG 360 LIRNSLVMNA PTQAYNDLGF QSFLRRSNQL NSYTQTCQLP LPADLNSCLS SAKQLGYAEG 420 SPKIGTLFSN IHLEGCDSDD NLSMELNTML PSEQKQQQFS SCSGLDVEMG AINDTSLVDA 480 YSNINENLNQ RSPLNFTTVS ARSSSPEIIA CLNDVAYEDD LHAALRQFSR S

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence

MDKCEDSMIA RGFPNELRVL AVDDDAFSLK MLERLLLECG YKVTIAQHAH DALKLLRENK  60
DIYDLVISDV KMPDMDGFKL LEILGLEMDL PVIMLSVDCD FKSVMKGIMH GAVDYLLKPI  120
RLEDIKVIWK HVVRKSLKEK KGSYDLWNKL DHARTSQDVP IKDFKSHGKE RDHDDSDDSD  180
DEATAQKKPR VTWTAELHAE FINAVNQLGL DRAVPKKILD IMNIPGLSRE NVASHLQKYR  240
RGLKRNGMGL SEHFNTYAGT SVYAGSSDFM TLNSRCSAIS FENFGVNGCK TMLAPSTYYP  300
AQQFPSGRAT MQPTWFTHPF NGQNDLNRKY ANNTKSSEVI TGPQHSINPQ TDQFVTENPG  360
LIRNSLVMNA PTQAYNDLGF QSFLRRSNQL NSYTQTCQLP LPADLNSCLS SAKQLGYAEG  420
SPKIGTLFSN IHLEGCDSDD NLSMELNTML PSEQKQQQFS SCSGLDVEMG AINDTSLVDA  480
YSNINENLNQ RSPLNFTTVS ARSSSPEIIA CLNDVAYEDD LHAALRQFSR S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-78	ARR-B family protein