PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020696546.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

bZIP

Protein Properties

Length: 386aa MW: 41575.8 Da PI: 4.8632

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020696546.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	69.8	4.3e-22	250	312	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e++lkre+rkq+NRe+ArrsR+RK+ae+eeL+++v +L+aeN+ L++e+ +l++ ++kl+ e+ XP_020696546.1 250 ERALKREKRKQSNRESARRSRLRKQAETEELATRVGSLSAENTNLISEITRLTESSEKLRIEN 312 799*******************************************************98776 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MGANEAIAPS KSERSPSVPE QPSVRSFPDW GSMQAYYGPG IPIPAPFFGS PVAPGHAPYP 60 YMWSPQPMLT PFGGPYTAIY PHGGVYSHPS ATHISSPANQ EVSVNPSTNK ERSTAKKIKG 120 IDVPVASNGN YDASAGCNEN RSESDENEDE GSSEGSAGNS ESGGSEKQRN RSSEDKSNSG 180 GKNLDIQANT VTGATTDVLP TISLGMTTSP GAVAPIPLAN LTPGMDFRSS TVSKQKPGSE 240 LILSTNAMDE RALKREKRKQ SNRESARRSR LRKQAETEEL ATRVGSLSAE NTNLISEITR 300 LTESSEKLRI ENSVLMEKLK MAELRQEEEL SSDRIYDEEA PSMVIENLLS RMDSSSNIEE 360 ETLENSNGKL HQLLDSKPRT DAVAAS

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MGANEAIAPS KSERSPSVPE QPSVRSFPDW GSMQAYYGPG IPIPAPFFGS PVAPGHAPYP  60
YMWSPQPMLT PFGGPYTAIY PHGGVYSHPS ATHISSPANQ EVSVNPSTNK ERSTAKKIKG  120
IDVPVASNGN YDASAGCNEN RSESDENEDE GSSEGSAGNS ESGGSEKQRN RSSEDKSNSG  180
GKNLDIQANT VTGATTDVLP TISLGMTTSP GAVAPIPLAN LTPGMDFRSS TVSKQKPGSE  240
LILSTNAMDE RALKREKRKQ SNRESARRSR LRKQAETEEL ATRVGSLSAE NTNLISEITR  300
LTESSEKLRI ENSVLMEKLK MAELRQEEEL SSDRIYDEEA PSMVIENLLS RMDSSSNIEE  360
ETLENSNGKL HQLLDSKPRT DAVAAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	267	273	RRSRLRK
2	267	274	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	6e-55	bZIP family protein