PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020696548.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

bZIP

Protein Properties

Length: 354aa MW: 38192.1 Da PI: 4.8988

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020696548.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	70	3.7e-22	218	280	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e++lkre+rkq+NRe+ArrsR+RK+ae+eeL+++v +L+aeN+ L++e+ +l++ ++kl+ e+ XP_020696548.1 218 ERALKREKRKQSNRESARRSRLRKQAETEELATRVGSLSAENTNLISEITRLTESSEKLRIEN 280 799*******************************************************98776 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MQAYYGPGIP IPAPFFGSPV APGHAPYPYM WSPQPMLTPF GGPYTAIYPH GGVYSHPSAT 60 HISSPANQEV SVNPSTNKER STAKKIKGID VPVASNGNYD ASAGCNENRS ESDENEDEGS 120 SEGSAGNSES GGSEKQRNRS SEDKSNSGGK NLDIQANTVT GATTDVLPTI SLGMTTSPGA 180 VAPIPLANLT PGMDFRSSTV SKQKPGSELI LSTNAMDERA LKREKRKQSN RESARRSRLR 240 KQAETEELAT RVGSLSAENT NLISEITRLT ESSEKLRIEN SVLMEKLKMA ELRQEEELSS 300 DRIYDEEAPS MVIENLLSRM DSSSNIEEET LENSNGKLHQ LLDSKPRTDA VAAS

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MQAYYGPGIP IPAPFFGSPV APGHAPYPYM WSPQPMLTPF GGPYTAIYPH GGVYSHPSAT  60
HISSPANQEV SVNPSTNKER STAKKIKGID VPVASNGNYD ASAGCNENRS ESDENEDEGS  120
SEGSAGNSES GGSEKQRNRS SEDKSNSGGK NLDIQANTVT GATTDVLPTI SLGMTTSPGA  180
VAPIPLANLT PGMDFRSSTV SKQKPGSELI LSTNAMDERA LKREKRKQSN RESARRSRLR  240
KQAETEELAT RVGSLSAENT NLISEITRLT ESSEKLRIEN SVLMEKLKMA ELRQEEELSS  300
DRIYDEEAPS MVIENLLSRM DSSSNIEEET LENSNGKLHQ LLDSKPRTDA VAAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	235	241	RRSRLRK
2	235	242	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	1e-49	bZIP family protein