PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020696580.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 141aa MW: 15645.4 Da PI: 9.5977

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020696580.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	109.7	1.5e-34	30	84	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLH+rF++av+qLGG+ekAtPkti++lm++kgLtl+h+kSHLQkYR+ XP_020696580.1 30 KPRLRWTAELHDRFIDAVAQLGGPEKATPKTIMRLMNIKGLTLYHLKSHLQKYRM 84 79****************************************************7 PP
2	Myb_DNA-binding	74.2	1.9e-23	32	83	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++++++dav+qlGg+ t+ktI+r m+ kg+tl+++ks++qky+ XP_020696580.1 32 RLRWTAELHDRFIDAVAQLGGPekaTPKTIMRLMNiKGLTLYHLKSHLQKYR 83 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 141 aa Download sequence
MYIKGGEFVG SLEGTNLPGD AALVLTSDPK PRLRWTAELH DRFIDAVAQL GGPEKATPKT 60 IMRLMNIKGL TLYHLKSHLQ KYRMGKQSLK ELENSNDGLS LSLSLSLPLR LCPLCLFVCS 120 GISLLPFVSD NHRIGKLLMH F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	4e-49	G2-like family protein