PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020696658.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 194aa    MW: 21956.9 Da    PI: 6.8099
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020696658.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP268.41.3e-2154104256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r++lg+f+tae+Aa a++aa+ kl+ge
  XP_020696658.1  54 LYRGVRQRH-WGKWVAEIRLPRN---RTRIWLGTFDTAEDAAMAYDAAAFKLRGE 104
                     59******9.**********955...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MTTFNDPNQV IHLNIMNPSS SINLSFSSLT STPQFTFLPP LPLSPHPPPT PPKLYRGVRQ  60
RHWGKWVAEI RLPRNRTRIW LGTFDTAEDA AMAYDAAAFK LRGEFANLNF PNLKHHIARS  120
AAAISLLEAK LKSFKDNGGG HDARKRKRME EEEEEEERRK VVMAEEEVDG VLLSTMPSLD  180
MDSIWDSLKD SGSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.13e-32ERF family protein