PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020697092.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 189aa    MW: 20380.4 Da    PI: 4.8319
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020697092.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.60.000194870123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y C+ C + F++   L  H+++H
  XP_020697092.1 48 YACSFCRRQFRSAQALGGHMNVH 70
                    89*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MTMLSYIRPA AGKDLVAATN DDDDSWEVRA FAEDTSNIMG TTWPPRFYAC SFCRRQFRSA  60
QALGGHMNVH RRDRARAQMQ ARPAAQHPII FAEAAAGGGG GGFCFVYPVV AGPAGQTRPS  120
TKDSSSSTFF SLSSSSSYNN VGTISFGASA SASDFSLIRT TSSDDHSKDE NDEEELTIEE  180
VDLELRLGC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.15e-25C2H2 family protein