PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020697108.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 190aa    MW: 21631.7 Da    PI: 8.858
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020697108.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.2e-1951100255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aa+a+++a+k + g
  XP_020697108.1  51 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFETAEDAARAYDEAAKFMCG 100
                     69******9.**********8.....334***********************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MCLGCLQKRT RLGVLFHSIF YHLSLYKRKA AGPLSSQNSN QNKQRMPKLQ RYRGVRQRHW  60
GSWVSEIRHP LLKTRIWLGT FETAEDAARA YDEAAKFMCG ARARTNFPPN SSSASALSPS  120
LVAKLEKCCI ASQEEMIRAK AEMEREEMKC MDDEFIEEMI EELRYYGSME ISSSYSSSSS  180
SSTSCSNSIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.12e-26ERF family protein