PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020697167.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GATA
Protein Properties Length: 261aa    MW: 28094.6 Da    PI: 8.2328
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020697167.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.62.6e-16182218135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C+ +   Tp++Rrgpdg++tLCnaCGl+++ kg+
  XP_020697167.1 182 CYHCHISAkdTPMMRRGPDGPRTLCNACGLMWANKGT 218
                     99**987778************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MSENPSSPVA EEPMAGGMEG LHESAGSLVS IDGDATTDHG VSIVPHVGGS QLTLSFQGEV  60
YVFDCVSPEK VQSVLLLLGG REVAAPLPSP PTSSTNQLNK RFNFSHRVAS LMRFREKRKE  120
RNFDKKIRYD VRKEVALRMQ RNKGQFTSSK SKAEGTLPGF AGMDSTSYLA AENGQPQTAS  180
ACYHCHISAK DTPMMRRGPD GPRTLCNACG LMWANKGTLR DLSKSPVTFQ HQTLESKDGE  240
GATATGQPTA AVPSNGQEIS H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.21e-72GATA family protein