PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020697301.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

FAR1

Protein Properties

Length: 680aa MW: 77580.5 Da PI: 8.1632

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020697301.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	87.6	1.8e-27	95	183	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fY++YA++vGF+vr+sks +s+ ++++++r+fvCsk+g++++++ +k+rr+r ++r gCka+l+v+++++g+w+v++++leH H+l XP_020697301.1 95 FYSAYAERVGFRVRNSKSFTSRVDDTVIMRRFVCSKQGRPTKKDPFdLTKKRRNRISSREGCKAMLQVNRRENGQWVVSRCVLEHCHPL 183 9************************************99887655899***********************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 680 aa Download sequence
MESASTLSAS LGFDHSQEDE VEPVIQIQSE QPHMDEQDIS ILSLVSVPLQ GGSGGESSRV 60 EHPGSECIDD FLTGSDQLEP RLGMEFDSSD DARAFYSAYA ERVGFRVRNS KSFTSRVDDT 120 VIMRRFVCSK QGRPTKKDPF DLTKKRRNRI SSREGCKAML QVNRRENGQW VVSRCVLEHC 180 HPLGIVPKQF PSLQKKLAKK PWELIPSSVS EAQQNGLGVG GGVAQSLLEY FKRMQTDNPA 240 FFYAVQVDQN NCLANVFWAD ARARMAYGYF GDAVVFDMTC KKNKRMVPFA AFSGMNHHRQ 300 LIVFGCAFMT DENEASFIWL FETWLSLMSG RYPVSFVTPF NEVIGSASAK VFPNVQHRFC 360 QRDIFRKCKE KLPDVYSEYA SFKNEFKKCV NESESSGEFE LSWRLLLDKY GLEGNMWLKS 420 LYNVRQRWVP VYIRGTFYAE MPGSALKSER MHNFFQRNSL TTTTLRDLVS QFDKAMAGQC 480 EKEIHADFAM IHSKPIMKTP SPMEKQASEI YTRVIFDLFQ EELVEASGFL MDKVEDGLIS 540 KFRVTKVDDT NRAYLVMYNA SEKTINCSCS MYETSGILCR HVFRVLMVLC VLTLPSEYIL 600 RRWTRNAKSA ILSYENCAHV PSNSFRAFSL RFNDLCRDAI RYAEEGATSA VIYKVAKEAF 660 QNAFNEVFSA KKGSFFNKAK

Sequence ? help Back to Top

Protein Sequence Length: 680 aa Download sequence

MESASTLSAS LGFDHSQEDE VEPVIQIQSE QPHMDEQDIS ILSLVSVPLQ GGSGGESSRV  60
EHPGSECIDD FLTGSDQLEP RLGMEFDSSD DARAFYSAYA ERVGFRVRNS KSFTSRVDDT  120
VIMRRFVCSK QGRPTKKDPF DLTKKRRNRI SSREGCKAML QVNRRENGQW VVSRCVLEHC  180
HPLGIVPKQF PSLQKKLAKK PWELIPSSVS EAQQNGLGVG GGVAQSLLEY FKRMQTDNPA  240
FFYAVQVDQN NCLANVFWAD ARARMAYGYF GDAVVFDMTC KKNKRMVPFA AFSGMNHHRQ  300
LIVFGCAFMT DENEASFIWL FETWLSLMSG RYPVSFVTPF NEVIGSASAK VFPNVQHRFC  360
QRDIFRKCKE KLPDVYSEYA SFKNEFKKCV NESESSGEFE LSWRLLLDKY GLEGNMWLKS  420
LYNVRQRWVP VYIRGTFYAE MPGSALKSER MHNFFQRNSL TTTTLRDLVS QFDKAMAGQC  480
EKEIHADFAM IHSKPIMKTP SPMEKQASEI YTRVIFDLFQ EELVEASGFL MDKVEDGLIS  540
KFRVTKVDDT NRAYLVMYNA SEKTINCSCS MYETSGILCR HVFRVLMVLC VLTLPSEYIL  600
RRWTRNAKSA ILSYENCAHV PSNSFRAFSL RFNDLCRDAI RYAEEGATSA VIYKVAKEAF  660
QNAFNEVFSA KKGSFFNKAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-158	FAR1 family protein