PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020697514.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 96aa    MW: 11073.4 Da    PI: 9.3968
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020697514.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.12.8e-0722631554
                    HHHHHHHHHHCTSCC.C....TTS-STCHHHHHHHHHHHHHH CS
             HLH 15 riNsafeeLrellPk.as.kapskKlsKaeiLekAveYIksL 54
                    ++++  ++L++llP  ++ ++++   s + +L++A++YI+sL
  XP_020697514.1 22 QVRELVSKLQTLLPRqQPlNNDNDTASTSRVLREACNYIRSL 63
                    5677789********5558888899***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MSSRRSRSSR QAASSSRITE QQVRELVSKL QTLLPRQQPL NNDNDTASTS RVLREACNYI  60
RSLHKEVDNL SERLSELLQN TDNDTDLEAV LRRMLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39860.11e-20bHLH family protein