PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020697666.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 220aa    MW: 24349 Da    PI: 8.4993
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020697666.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88.3e-057496123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C + F+++  L  H++ H
  XP_020697666.1 74 FECNYCFRNFPTSQALGGHQNAH 96
                    89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MSERETQDFL NVDSFSQLPF IRRDHKPPNA PIRLFGFDFP PEPPTSIDTN KRRCYPADEH  60
TGSPSDATEI ARKFECNYCF RNFPTSQALG GHQNAHKRER QHAKRAHLAA ASAEGHLHGM  120
IGYHRLGLQS SAVPPPPPPL HYNSWSLSAG SGGGVRFYGR LGSVAQPING SPMLGSWREP  180
AAAPLPLFSG DEERRTTSSA QRERHGYNES KDGVSLDLHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58070.15e-29C2H2 family protein