PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020697748.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ZF-HD
Protein Properties Length: 85aa    MW: 9678.08 Da    PI: 7.9296
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020697748.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer79.73.6e-251967457
     ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                      Y eC+kNhAa+ Gg++vDGC+Efm+      + + lkCaACgCHR+FHR  +
  XP_020697748.1 19 ESYGECRKNHAAREGGYVVDGCREFMAG-----EEDELKCAACGCHRSFHRIVM 67
                    68*************************7.....3467**************765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 85 aa     Download sequence    
MKKLYVVLRR CERAFSAAES YGECRKNHAA REGGYVVDGC REFMAGEEDE LKCAACGCHR  60
SFHRIVMQCD QGFCDCGTSF LVRRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.16e-20ZF-HD family protein