PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020697801.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family HSF
Protein Properties Length: 312aa    MW: 34754.2 Da    PI: 6.3182
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020697801.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind116.41.7e-36221122101
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++d+el+++isw+eng++f+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+k+  ++         weF+++sFk+g+k+ll++
  XP_020697801.1  22 FLTKTYQLVDDPELDDVISWNENGSTFIVWRPVEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANDSFKRGEKRLLSE 107
                     9*****************************************************************99.........****************** PP

                     XXXXX CS
    HSF_DNA-bind  97 ikrkk 101
                     i+r+k
  XP_020697801.1 108 IHRRK 112
                     ***97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MAAPQPTATG TQEGQRSIPT PFLTKTYQLV DDPELDDVIS WNENGSTFIV WRPVEFARDL  60
LPKYFKHNNF SSFVRQLNTY GFRKIVPDRW EFANDSFKRG EKRLLSEIHR RKIFQQAAVP  120
AQPTAIPAQP VAMVVPANQT ESPVSSGDEQ VISSYSSQGV LEACSSEAEL REENERLRRE  180
NARLLKELGQ MKGLCNKILQ VMSKYDAGYQ INGGEAAGCG AGRLEADGSP ELEMLLARGP  240
VKLEAGVFPR LFGVAIGSKR GRAEQVEEES QRSVVDVKTK PSDLAADRTV QVIGQETWRL  300
DCSRPNHVAF KE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.12e-66HSF family protein