PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020697960.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family MYB_related
Protein Properties Length: 204aa    MW: 22715.4 Da    PI: 4.3465
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020697960.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.31.7e-0830522447
                     HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqky 47
                     W++Ia +++ gRt++++k++w++ 
   XP_020697960.1 30 WSLIAGRLP-GRTDNEIKNYWNTT 52
                     *********.************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MASSSVGPGV RTAEGRTGMG EALDPPELLW SLIAGRLPGR TDNEIKNYWN TTLGKKASFQ  60
RQIQHIHKPS NIRRPKASNH LLPSSSPPPP QTKNNTTLNQ TMAMRCSKLV FPLSLPSSSA  120
SKQSPPTMQL AEESMAKVTS EMPEEEELFQ AVEENMEFED QAVMEFEGLQ DFDSWVFNDE  180
EEDYLPDDDQ MQMLTSLFGM GGGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.15e-13MYB family protein