PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020697994.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family Dof
Protein Properties Length: 247aa    MW: 27385.3 Da    PI: 8.1987
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020697994.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof128.22.4e-4040101263
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 
                     +e+al+cprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss
  XP_020697994.1  40 PEQALRCPRCDSTNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNKRSSS 101
                     7899******************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MEISNANEQQ VMSSHGLEEL FIACRKPPAP ALEKKTRTQP EQALRCPRCD STNTKFCYYN  60
NYSLSQPRYF CKGCRRYWTK GGSLRNVPVG GGCRKNKRSS SSSSLSSSSS SSSNSIIPSS  120
EKPQDDQTSF ISYSHGELTL AFSRQVWPSF ADHERFFLGN PNPNSGSSGG YLNFMRNGFL  180
ETSNINGYHQ INYGNNGSVV EEVEGNNPNT TERSCKMLMD IQMSNGVDGS LGMEYSSWHG  240
IINSSLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.12e-39Dof family protein