PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020698032.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

WOX

Protein Properties

Length: 192aa MW: 21645.4 Da PI: 9.0574

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020698032.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.6	6.7e-21	6	66	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++t+eql +Lee++++ r+p+a+++++++++l +++ ++V++WFqN++a++++ XP_020698032.1 6 STRWCPTPEQLMILEEMYRSgVRTPNASQIQQITSHLsfygKIEGKNVFYWFQNHKARDRQ 66 58***************99***********************************996 PP
2	Wus_type_Homeobox	121.7	3e-39	6	67	3	64
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +tRW+PtpeQ++iLee+y+sG+rtPn+++iq+it++L+ yGkie+kNVfyWFQN+kaR+rqk XP_020698032.1 6 STRWCPTPEQLMILEEMYRSGVRTPNASQIQQITSHLSFYGKIEGKNVFYWFQNHKARDRQK 67 79***********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence
MPQVPSTRWC PTPEQLMILE EMYRSGVRTP NASQIQQITS HLSFYGKIEG KNVFYWFQNH 60 KARDRQKLRR RLSRQQVQVA SASLPPHPPP QFFPHLYQPH NPQFFHQGGG FQEPRQGLDL 120 LRKLETCSSR EEASPSGASP ASIYGCEWAA MISGESSMCC HSLKTLELFP TKSTGLKEES 180 STSKSSCSAS TN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28610.1	6e-34	WOX family protein