PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020698191.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 249aa    MW: 27664.3 Da    PI: 9.9565
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020698191.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.88.6e-163685255
             AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr+ + +grWvAeI+       ++ r +lg+f+tae Aa a+++a+  l+g
  XP_020698191.1 36 RYTGVRQSP-SGRWVAEIKG----TaQKIRLWLGTFDTAEAAAHAYDEAACLLRG 85
                    79*******.7******655....2457**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MVQKIGSRKN MDPTVKINET VSKQLSISIG RQQRKRYTGV RQSPSGRWVA EIKGTAQKIR  60
LWLGTFDTAE AAAHAYDEAA CLLRGANTRT NFWPRNQGGF GSSNTGSSSV LSTKVLNQLL  120
ERLEEQRASK SSRHCLSSVP SKSPLFPPPP PSPPPQHQQQ HHKHNQELEL IKRMAYGDLF  180
SEVGTSSAAT THDEIMKGKV QRGGNLVDMD LRLEDFSCFF APLEIEGREK VEIGIYEYWS  240
KLSAAANGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-20ERF family protein